UMAP
Differential Abundance
UMAP embedding for bacterial profiles
Color by:
Plot
plant
Plant_species
Sampling_date
Name
provenance
color
texture
gravel
conductivity
ph
ph_solid_h2o
ammonium_nitrogen
nitrate_nitrogen
phosphorus_colwell
potassium_colwell
sulfur
organic_carbon
alphadiv
UMAP: Number of Neighbors
UMAP: Local Connectivity
UMAP: Minimum distance
Selected samples
Differential abundance for bacteria
Select variable for the contrast:
Plot
plant
Plant_species
Sampling_date
Name
provenance
color
texture
gravel
conductivity
ph
ph_solid_h2o
ammonium_nitrogen
nitrate_nitrogen
phosphorus_colwell
potassium_colwell
sulfur
organic_carbon
alphadiv
Run DA Analysis
DA Summary
Select Contrast: